gts-join - join the sequences contained in the files
gts-join [--version] [-h | --help] [args] seqin
gts-join takes a single input sequence and joins its contents into a single sequence. If the sequence input is ommited, standard input will be read instead. This command will make no attempt to restore features that originated from a single sequence which is fragmented across different entries. To repair such features, first run gts-join and pass the output to gts-repair(1).
<seqin>Input sequence file (may be omitted if standard input is provided). See gts-seqin(7) for a list of currently supported list of sequence formats.
-c, --circularOutput the sequence as circular if possible.
-F <format>, --format=<format>Output file format (defaults to same as input). See gts-seqout(7) for a list of currently supported list of sequence formats. The format specified with this option will override the file type detection from the output filename.
--no-cacheDo not use or create cache. See gts-cache(7) for details.
--no-cacheDo not use or create cache. See gts-cache(7) for details.
-o <output>, --output=<output>Output sequence file (specifying - will force standard output). The
output file format will be automatically detected from the filename if none
is specified with the -F or --format option.
gts-join currently has no known bugs.
gts-join is written and maintained by Kotone Itaya.
gts(1), gts-split(1), gts-repair(1), gts-seqin(7), gts-seqout(7)