gts-selector
[feature_key][/[qualifier1][=regexp1]][/[qualifier2][=regexp2]]...
gts-selectors are patterns for selecting sequence features that match the
given selector. A selector consists of a single feature key and/or multiple
qualifier matchers. A feature key must currently be a perfect match
(case sensitive) and if omitted all feature keys will match. A qualifier
matcher has two parts: a qualifier name and a regular expression delimited by
the =
sign. The qualifier name must currently be a perfect match (case
sensitive) and if omitted all qualifier names will match. The regular
expression will be tested against the contents of the qualifier value. If
omitted, any features that has the qualifier with the given qualifier name will
match.
Select all gene
features:
gene
Select all CDS
features that produce a DNA-binding product
:
CDS/product=DNA-binding
Select all features with locus_tag
of b0001
:
/locus_tag=b0001
Select all features with the qualifier translation
:
/translation
Select all features with a qualifier value matching recombinase
/=recombinase
gts(1), gts-select(1), gts-locator(7)