gts-define - define a new feature
gts-define [--version] [-h | --help] [args] key location seqin
gts-define takes a single sequence input and defines a new feature with the
given key and location. If the sequence input is ommited, standard input
will be read instead. Feature qualifiers may be added by using the -q or
--qualifier option, which may be given multiple times to add more than one
qualifier to the feature.
<key>Feature key.
<location>Feature location.
<seqin>Input sequence file (may be omitted if standard input is provided). See gts-seqin(7) for a list of currently supported list of sequence formats.
-F <format>, --format=<format>Output file format (defaults to same as input). See gts-seqout(7) for a list of currently supported list of sequence formats. The format specified with this option will override the file type detection from the output filename.
--no-cacheDo not use or create cache. See gts-cache(7) for details.
-o <output>, --output=<output>Output sequence file (specifying - will force standard output). The
output file format will be automatically detected from the filename if none
is specified with the -F or --format option.
-q <qualifier>, --qualifier=<qualifier>Qualifier key-value pairs (syntax: key=value)). Multiple values may be set by repeatedly passing this option to the command.
gts-define currently has no known bugs.
gts-define is written and maintained by Kotone Itaya.
gts(1), gts-annotate(1), gts-seqin(7), gts-seqout(7)